6Y4L
Crystal structure of human ER membrane protein complex subunits EMC2 and EMC9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-13 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.577, 84.939, 122.585 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.700 - 2.200 |
R-factor | 0.2064 |
Rwork | 0.203 |
R-free | 0.24990 |
Structure solution method | SAD |
Starting model (for MR) | XXXX |
RMSD bond length | 0.007 |
RMSD bond angle | 0.844 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.700 | 2.780 | 2.270 |
High resolution limit [Å] | 2.200 | 2.650 | 2.200 |
Number of reflections | 28668 | 2109 | 2433 |
<I/σ(I)> | 17.6 | 1.8 | 1.9 |
Completeness [%] | 100.0 | ||
Redundancy | 51.9 | ||
CC(1/2) | 1.000 | 0.817 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.3 | 293.15 | 34% PEG4000, 0.1 M Tris pH 8.3, and 0.2 M lithium sulfate (For I03 native dataset) |
1 | VAPOR DIFFUSION, HANGING DROP | 8.3 | 293.15 | 34% PEG4000, 0.1 M Tris pH 8.3, and 0.2 M lithium sulfate (For I03 native dataset) |