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6Y4I

Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.2
Synchrotron siteBESSY
Beamline14.2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-01
DetectorDECTRIS PILATUS3 S 2M
Wavelength(s)0.9184
Spacegroup nameP 61 2 2
Unit cell lengths92.612, 92.612, 129.969
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.310 - 1.160
R-factor0.127
Rwork0.126
R-free0.13960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5lvd
RMSD bond length0.006
RMSD bond angle0.932
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.3101.230
High resolution limit [Å]1.1601.160
Rmeas0.0990.525
Number of reflections11318517875
<I/σ(I)>10.362.5
Completeness [%]99.798.9
Redundancy6.426.3
CC(1/2)0.9960.879
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5291.152.0 M CsCl, 50 mM Tris(hydroxymethyl)aminomethan, 50% DMSO

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