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6XXO

Crystal structure of NB8, a nanobody targeting prostate specific membrane antigen

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9677
Spacegroup nameI 2 2 2
Unit cell lengths55.945, 68.857, 75.647
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.520 - 1.500
R-factor0.1634
Rwork0.162
R-free0.18320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5m7q
RMSD bond length0.007
RMSD bond angle0.943
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.5201.590
High resolution limit [Å]1.5001.500
Rmerge0.028
Rmeas0.117
Number of reflections232833733
<I/σ(I)>28.37
Completeness [%]97.9
Redundancy3.9
CC(1/2)0.9990.988
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1M tri-Na Citrate pH 3.5, 3M NaCl

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