6XVW
Catalytic domain of human PARP-1 in complex with the inhibitor MC2050
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-14 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.000020 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.172, 86.727, 127.635 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 71.730 - 2.000 |
R-factor | 0.2313 |
Rwork | 0.230 |
R-free | 0.26470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zzz |
RMSD bond length | 0.003 |
RMSD bond angle | 0.567 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (1.14_3260) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.734 | 71.734 | 2.120 |
High resolution limit [Å] | 2.000 | 5.980 | 2.000 |
Rmerge | 0.072 | 0.021 | 1.474 |
Rmeas | 0.092 | 0.027 | 1.884 |
Number of reflections | 96367 | 3585 | 15174 |
<I/σ(I)> | 7.62 | 31.04 | 0.6 |
Completeness [%] | 97.6 | 96.9 | 95.9 |
Redundancy | 2.334 | 2.347 | 2.287 |
CC(1/2) | 0.998 | 0.999 | 0.213 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1 M TRIS pH 8.5, 20% (w/w) PEG 2.000 MME, 0.01 M NiCl2 |