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6XVD

Crystal structure of complex of urokinase and a upain-1 variant(W3F) in pH7.4 condition

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-18
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979
Spacegroup nameH 3
Unit cell lengths121.292, 121.292, 43.000
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.830 - 1.400
R-factor0.1871
Rwork0.186
R-free0.20250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4dva
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (v1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.6501.450
High resolution limit [Å]1.4001.400
Rmerge0.0560.056
Number of reflections4633746337
<I/σ(I)>25.96
Completeness [%]99.9
Redundancy5.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.52930.05 M sodium citrate at pH 4.5, 1.95 M (NH4)2SO4, 0.05% NaN3, and 5% PEG400

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