6XPR
Human antibody D2 H1-1/H3-1 H3 in complex with the influenza hemagglutinin head domain of A/Texas/50/2012(H3N2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2018-10-23 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97910 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 204.490, 204.490, 132.490 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.117 - 4.092 |
R-factor | 0.2541 |
Rwork | 0.252 |
R-free | 0.29810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 5W08 4y5v & 6E4X |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.120 | 4.238 |
High resolution limit [Å] | 4.092 | 4.092 |
Rmerge | 0.306 | 0.855 |
Rmeas | 0.361 | 1.012 |
Rpim | 0.190 | 0.533 |
Number of reflections | 25192 | 8466 |
<I/σ(I)> | 4.53 | 1.6 |
Completeness [%] | 98.4 | 98.07 |
Redundancy | 3.4 | 3.4 |
CC(1/2) | 0.965 | 0.776 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 291.15 | 0.1 M lithium sulfate, 30% v/v PEG400, 0.1 M trisodium citrate, pH 5.6 |