6XIG
X-ray crystal structure of MqnE from Pedobacter heparinus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-28 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.98393 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 72.968, 75.403, 83.921 |
Unit cell angles | 90.00, 107.69, 90.00 |
Refinement procedure
Resolution | 19.920 - 1.590 |
R-factor | 0.1572 |
Rwork | 0.156 |
R-free | 0.18270 |
Structure solution method | SAD |
RMSD bond length | 0.014 |
RMSD bond angle | 2.004 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | HKL2Map |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 1.630 |
High resolution limit [Å] | 1.590 | 4.330 | 1.600 |
Rmerge | 0.062 | 0.025 | 0.614 |
Rmeas | 0.074 | 0.029 | 0.729 |
Rpim | 0.040 | 0.015 | 0.387 |
Number of reflections | 216048 | 11290 | 10990 |
<I/σ(I)> | 8.4 | ||
Completeness [%] | 95.5 | 99.8 | 97.4 |
Redundancy | 3.3 | 3.8 | 3.4 |
CC(1/2) | 0.999 | 0.685 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.2 M K-Na-Tartrate, 20% polyethylene glycol 3,350 |