6XG3
The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, at room temperature
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 295 |
Detector technology | PIXEL |
Collection date | 2020-05-26 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 82.439, 82.439, 135.713 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.230 - 2.480 |
R-factor | 0.1535 |
Rwork | 0.151 |
R-free | 0.19300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wrh |
RMSD bond length | 0.010 |
RMSD bond angle | 1.578 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.230 | 49.230 | 2.540 |
High resolution limit [Å] | 2.480 | 6.780 | 2.500 |
Rmerge | 0.167 | 0.068 | 1.607 |
Rmeas | 0.176 | 0.072 | 1.707 |
Rpim | 0.056 | 0.024 | 0.570 |
Number of reflections | 19357 | 1079 | 942 |
<I/σ(I)> | 3.7 | 1.4 | |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 9.8 | 9.1 | 8.9 |
CC(1/2) | 0.997 | 0.514 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 277 | 0.1 M acetate buffer, 0.8 NaH2PO4/1.2 M K2HPO4 |