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6XG3

The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, at room temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]295
Detector technologyPIXEL
Collection date2020-05-26
DetectorDECTRIS PILATUS3 X 6M
Wavelength(s)0.9792
Spacegroup nameP 32 2 1
Unit cell lengths82.439, 82.439, 135.713
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.230 - 2.480
R-factor0.1535
Rwork0.151
R-free0.19300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6wrh
RMSD bond length0.010
RMSD bond angle1.578
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.23049.2302.540
High resolution limit [Å]2.4806.7802.500
Rmerge0.1670.0681.607
Rmeas0.1760.0721.707
Rpim0.0560.0240.570
Number of reflections193571079942
<I/σ(I)>3.71.4
Completeness [%]100.099.8100
Redundancy9.89.18.9
CC(1/2)0.9970.514
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.52770.1 M acetate buffer, 0.8 NaH2PO4/1.2 M K2HPO4

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PDB entries from 2024-11-06

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