6X8H
Caspase-8 in complex with AOMK inhibitor, Ac-DW3-KE, forms tetrahedral adduct
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | .98 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 62.498, 62.498, 129.360 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.931 - 1.480 |
R-factor | 0.1498 |
Rwork | 0.149 |
R-free | 0.16720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jj7 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.510 |
High resolution limit [Å] | 1.480 | 4.020 | 1.480 |
Rmerge | 0.128 | 0.068 | 0.684 |
Rmeas | 0.133 | 0.071 | 0.740 |
Rpim | 0.036 | 0.019 | 0.275 |
Number of reflections | 49543 | 2705 | 2382 |
<I/σ(I)> | 0.22 | ||
Completeness [%] | 99.8 | 99.8 | 98.5 |
Redundancy | 13.3 | 13.4 | 7 |
CC(1/2) | 0.970 | 0.997 | 0.799 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.1 | 295 | 1:1 protein : 0.10 M HEPES, 1.0 M sodium citrate |