6X86
Crystal Structure of TNFalpha with indolinone compound 11
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 17-ID |
| Synchrotron site | APS |
| Beamline | 17-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-02-04 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.978720 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 249.698, 64.712, 53.647 |
| Unit cell angles | 90.00, 94.42, 90.00 |
Refinement procedure
| Resolution | 124.480 - 2.930 |
| R-factor | 0.183 |
| Rwork | 0.180 |
| R-free | 0.24400 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1tnf |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.230 |
| Data reduction software | XDS (20171218) |
| Data scaling software | Aimless (0.7.4) |
| Refinement software | BUSTER (2.11.7) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 125.000 | 2.980 |
| High resolution limit [Å] | 2.930 | 2.930 |
| Rmerge | 0.075 | 0.630 |
| Number of reflections | 18536 | 974 |
| <I/σ(I)> | 10 | 3.8 |
| Completeness [%] | 99.8 | 99.9 |
| Redundancy | 3.7 | 3.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6.5 | 293 | 15% PEG8000, 0.2M magnesium acetate, 0.05M sodium cacadylate, pH 6.5 |
