6X4T
Crystal structure of ICOS-L in complex with Prezalumab and VNAR domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.033158 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 68.508, 151.984, 86.675 |
Unit cell angles | 90.00, 104.10, 90.00 |
Refinement procedure
Resolution | 38.880 - 3.150 |
R-factor | 0.2035 |
Rwork | 0.201 |
R-free | 0.25620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1i8l 4i0k 1t6v internal database |
RMSD bond length | 0.004 |
RMSD bond angle | 0.807 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 3.250 |
High resolution limit [Å] | 3.150 | 3.150 |
Rmerge | 0.170 | 0.670 |
Rpim | 0.068 | 0.270 |
Number of reflections | 29746 | 1378 |
<I/σ(I)> | 9.4 | 1.7 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7 | 7 |
CC(1/2) | 0.990 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.2 M di-ammonium tartrate and 20% (w/v) PEG 3350 |