6X2E
Crystal Structure of Chlamydia trachomatis mixed (apo/holo) Glyceraldehyde 3-phosphate dehydrogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-22 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.222, 104.240, 85.990 |
Unit cell angles | 90.00, 97.48, 90.00 |
Refinement procedure
Resolution | 85.260 - 1.800 |
R-factor | 0.1771 |
Rwork | 0.175 |
R-free | 0.22000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wyc |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18rc2_3794) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 85.260 | 85.260 | 1.830 |
High resolution limit [Å] | 1.800 | 9.860 | 1.800 |
Rmerge | 0.085 | 0.031 | 0.669 |
Rmeas | 0.104 | 0.037 | 0.822 |
Rpim | 0.059 | 0.020 | 0.470 |
Number of reflections | 104308 | 645 | 5273 |
<I/σ(I)> | 9.3 | 1.6 | |
Completeness [%] | 97.5 | 93.6 | 99.1 |
Redundancy | 2.8 | 3.1 | 2.8 |
CC(1/2) | 0.994 | 0.998 | 0.640 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 294 | 25% PEG 2000 MME, 0.1 M Hepes, pH 7.5; prior to crystallization the protein (at 30 mg/ml) was incubated with 1 mM NAD |