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6X0I

Structure of oxidized SidA ornithine hydroxylase with the FAD "in" and complexed with NADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2016-04-27
DetectorRDI CMOS_8M
Wavelength(s)1.00004
Spacegroup nameP 1 21 1
Unit cell lengths80.507, 154.868, 90.483
Unit cell angles90.00, 109.25, 90.00
Refinement procedure
Resolution63.210 - 1.950
R-factor0.1703
Rwork0.168
R-free0.21100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4b63
RMSD bond length0.006
RMSD bond angle0.869
Data reduction softwareXDS
Data scaling softwareAimless (0.5.23)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]63.21063.2101.980
High resolution limit [Å]1.95010.6801.950
Rmerge0.0920.0220.790
Rmeas0.1080.0260.947
Rpim0.0560.0140.516
Total number of observations544409344024487
Number of reflections1510859547458
<I/σ(I)>12.146.41.5
Completeness [%]99.598.299
Redundancy3.63.63.3
CC(1/2)0.9970.9990.523
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.5293Enzyme stock solution: 8-10 mg/mL SidA and 1 mM NADP in 25 mM HEPES (pH 7.5) and 100 mM NaCl. Crystallization reservoir: 17-21 % PEG-3350, 0.1 M HEPES (pH 7.5), 0.1 M calcium acetate. Cryo-buffer: 15 % PEG-200, 20 % PEG 3350, 0.1 M HEPES (pH 7.5), 0.1 M calcium acetate

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