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6X0H

Structure of oxidized SidA ornithine hydroxylase with the FAD in the "out" conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-25
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.979180
Spacegroup nameP 1 21 1
Unit cell lengths76.765, 156.937, 88.651
Unit cell angles90.00, 110.38, 90.00
Refinement procedure
Resolution65.411 - 2.087
R-factor0.1849
Rwork0.182
R-free0.23220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4b63
RMSD bond length0.007
RMSD bond angle0.919
Data reduction softwareXDS
Data scaling softwareAimless (0.5.23)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]156.940156.9402.120
High resolution limit [Å]2.08711.4302.090
Rmerge0.1100.0250.858
Rmeas0.1420.0321.113
Rpim0.0880.0200.702
Total number of observations165910926
Number of reflections1145426965054
<I/σ(I)>617.61
Completeness [%]98.495.487.4
Redundancy2.32.42.2
CC(1/2)0.9910.9970.416
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.5293Enzyme stock solution: 8-10 mg/mL SidA in 25 mM HEPES (pH 7.5) and 100 mM NaCl. Crystallization reservoir: 17-21 % PEG-3350, 0.1 M HEPES (pH 7.5), 0.1 M calcium acetate. Cryo-buffer: 15 % PEG-200, 20 % PEG 3350, 0.1 M HEPES (pH 7.5), 0.1 M calcium acetate

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