6WT3
Structural basis for the binding of monoclonal antibody 5D2 to the tryptophan-rich lipid-binding loop in lipoprotein lipase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-01-21 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 138.790, 37.070, 107.960 |
Unit cell angles | 90.00, 126.19, 90.00 |
Refinement procedure
Resolution | 43.570 - 2.850 |
R-factor | 0.256 |
Rwork | 0.253 |
R-free | 0.30760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wn4 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.689 |
Data reduction software | XDS (20200131) |
Data scaling software | STARANISO (2.3.28) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX ((1.18_3855: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.570 | 2.910 |
High resolution limit [Å] | 2.848 | 2.848 |
Rmerge | 0.164 | 0.515 |
Rpim | 0.116 | 0.407 |
Number of reflections | 10111 | 525 |
<I/σ(I)> | 4.9 | 1.6 |
Completeness [%] | 97.7 | 80.3 |
Redundancy | 2.8 | 2.1 |
CC(1/2) | 0.976 | 0.617 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 100mM 2-(N-morpholino)ethanesulfonic acid, 150mM ammonium sulfate, 24% PEG 4000 |