6WG4
Crystal structure of human SMC1-SMC3 hinge domain heterodimer in south-open conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-12-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97926 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 78.291, 119.612, 127.119 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.560 - 2.310 |
R-factor | 0.1877 |
Rwork | 0.183 |
R-free | 0.23540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wd5 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.052 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.053 | 1.108 |
Rmeas | 0.055 | 1.180 |
Rpim | 0.015 | 0.389 |
Number of reflections | 21541 | 751 |
<I/σ(I)> | 43.6 | 1.2 |
Completeness [%] | 98.5 | 86 |
Redundancy | 12.3 | |
CC(1/2) | 0.999 | 0.768 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293.15 | 2% 1,4-dioxane, 0.1 Tris pH 8.0, 15% polyethylene glycol 3350 |