6W8J
Structure of DNMT3A (R882H) in complex with CAG DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-07 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.5 |
Spacegroup name | H 3 |
Unit cell lengths | 205.943, 205.943, 89.371 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.346 - 2.445 |
R-factor | 0.1847 |
Rwork | 0.183 |
R-free | 0.22260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5XY2 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.350 | 2.540 |
High resolution limit [Å] | 2.445 | 2.450 |
Number of reflections | 52247 | 51900 |
<I/σ(I)> | 7.8 | |
Completeness [%] | 100.0 | |
Redundancy | 4.8 | |
CC(1/2) | 0.992 | 0.404 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.1 M Sodium Citrate pH 4.4, 0.2 % PEG8000 |