6W5K
1.95 A resolution structure of Norovirus 3CL protease in complex with inhibitor 5g
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.697, 124.899, 64.137 |
Unit cell angles | 90.00, 93.09, 90.00 |
Refinement procedure
Resolution | 37.640 - 1.950 |
R-factor | 0.2251 |
Rwork | 0.222 |
R-free | 0.28820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ur9 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.18rc4_3812) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.710 | 2.000 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.166 | 0.988 |
Total number of observations | 290570 | 20460 |
Number of reflections | 42933 | 3021 |
<I/σ(I)> | 7.4 | 2.1 |
Completeness [%] | 99.6 | 99.3 |
Redundancy | 6.8 | 6.8 |
CC(1/2) | 0.992 | 0.799 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 25% w/v PEG3350, 0.1M Tris, 200 mM Trimethylamine N-oxide dihydrate |