6W5A
Crystal Structure of the Fab fragment of humanized 5c8 antibody containing the fluorescent non-canonical amino acid L-(7-hydroxycoumarin-4-yl)ethylglycine at pH 9.7
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-11-29 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.91976 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 91.861, 60.182, 73.258 |
| Unit cell angles | 90.00, 98.94, 90.00 |
Refinement procedure
| Resolution | 72.370 - 1.750 |
| R-factor | 0.1949 |
| Rwork | 0.193 |
| R-free | 0.24070 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6bjz |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.723 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER (2.6.1) |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 72.370 | 50.000 | 1.780 |
| High resolution limit [Å] | 1.750 | 4.750 | 1.750 |
| Rmerge | 0.153 | 0.125 | 0.694 |
| Rmeas | 0.175 | 0.142 | 0.804 |
| Rpim | 0.082 | 0.067 | 0.400 |
| Number of reflections | 39519 | 2054 | 1985 |
| <I/σ(I)> | 5.3 | ||
| Completeness [%] | 99.0 | 99 | 99.5 |
| Redundancy | 4.2 | 4.4 | 3.7 |
| CC(1/2) | 0.961 | 0.662 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 273 | 30% PEG 3350, 0.1 M Citric Acid/Sodium Citrate pH 3.8 |






