6VNS
Crystal structure of TYK2 kinase with compound 13
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-11-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.431, 73.126, 102.681 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.560 - 2.090 |
R-factor | 0.1877 |
Rwork | 0.185 |
R-free | 0.23130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lxp |
RMSD bond length | 0.010 |
RMSD bond angle | 1.110 |
Data scaling software | SCALA (3.3.16) |
Refinement software | BUSTER (2.11.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 102.681 | 102.681 | 2.200 |
High resolution limit [Å] | 2.086 | 6.600 | 2.090 |
Rmerge | 0.021 | 0.232 | |
Rmeas | 0.071 | 0.025 | 0.356 |
Rpim | 0.029 | 0.010 | 0.197 |
Total number of observations | 89814 | 3483 | 7339 |
Number of reflections | 16716 | 624 | 2397 |
<I/σ(I)> | 23.1 | 68 | 3.6 |
Completeness [%] | 98.0 | 99.3 | 98.3 |
Redundancy | 5.4 | 5.6 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8 | 298 | 0.1 M bis-tris pH 5.5, 0.25 M NaCl, 10 mM TCEP, 27-33% PEG-3350 |