6VKD
Crystal Structure of Inhibitor JNJ-36689282 in Complex with Prefusion RSV F Glycoprotein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97926 |
Spacegroup name | P 41 3 2 |
Unit cell lengths | 168.610, 168.610, 168.610 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.063 - 2.500 |
R-factor | 0.1987 |
Rwork | 0.197 |
R-free | 0.22910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ea3 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.063 | 45.060 | 2.600 |
High resolution limit [Å] | 2.500 | 9.010 | 2.500 |
Rmerge | 0.168 | 0.041 | 2.082 |
Rmeas | 0.172 | 0.043 | 2.133 |
Rpim | 0.038 | 0.010 | 0.458 |
Total number of observations | 12060 | 68301 | |
Number of reflections | 28955 | 736 | 3188 |
<I/σ(I)> | 15.7 | 47.4 | 1.9 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 20.3 | 16.4 | 21.4 |
CC(1/2) | 0.999 | 0.999 | 0.500 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 1.64M K/Na tartrate, 0.2M LiSO4, 0.1M CHES pH 9.5 |