6VF7
DNA Polymerase Mu, 8-oxodGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.159, 68.927, 110.446 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.035 - 1.871 |
R-factor | 0.1673 |
Rwork | 0.166 |
R-free | 0.19670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m04 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.900 |
High resolution limit [Å] | 1.870 | 5.070 | 1.870 |
Rmerge | 0.093 | 0.046 | 0.930 |
Rmeas | 0.104 | 0.051 | 1.038 |
Rpim | 0.045 | 0.022 | 0.454 |
Total number of observations | 194774 | ||
Number of reflections | 38515 | 2099 | 1891 |
<I/σ(I)> | 8.4 | ||
Completeness [%] | 99.5 | 99.1 | 99.8 |
Redundancy | 5.1 | 5.2 | 4.8 |
CC(1/2) | 0.997 | 0.605 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 85-90mM HEPES pH 7.5, 17-18% PEG4000 |