Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VEI

Crystal Structure of Human Cytosolic Isocitrate Dehydrogenase (IDH1) R132H Mutant in Complex with NADPH and AG-881 (Vorasidenib) Inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17B1
Synchrotron siteSSRF
BeamlineBL17B1
Temperature [K]100
Detector technologyCCD
Collection date2015-07-04
DetectorADSC QUANTUM 315r
Wavelength(s)0.97915
Spacegroup nameP 21 21 2
Unit cell lengths117.213, 85.099, 96.663
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.510 - 2.100
R-factor0.1594
Rwork0.158
R-free0.19520
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3inm
RMSD bond length0.002
RMSD bond angle0.467
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.140
High resolution limit [Å]2.1002.100
Rmerge0.1010.476
Number of reflections571332817
<I/σ(I)>9.5
Completeness [%]99.8100
Redundancy7.17.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP429320% PEG 3350, 8% Tacsimate pH 4.0

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon