6VBZ
Crystal structure of the rat MLKL pseudokinase domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 293.15 |
Detector technology | PIXEL |
Collection date | 2018-07-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 190.057, 190.057, 77.759 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.577 - 2.192 |
R-factor | 0.1843 |
Rwork | 0.181 |
R-free | 0.21500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mwi |
RMSD bond length | 0.010 |
RMSD bond angle | 1.137 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.577 | 2.270 |
High resolution limit [Å] | 2.190 | 2.190 |
Rmerge | 0.103 | 1.328 |
Rmeas | 0.108 | |
Rpim | 0.033 | |
Number of reflections | 42719 | 3608 |
<I/σ(I)> | 17.9 | |
Completeness [%] | 99.9 | 99 |
Redundancy | 20.2 | |
CC(1/2) | 0.880 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | manganese chloride, polyethylene glycol 400, sodium MES |