6V8K
Crystal structure of the p300 acetyltransferase domain with peptide-competitive inhibitor 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.12723 |
Spacegroup name | P 43 |
Unit cell lengths | 60.669, 60.669, 100.647 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.670 - 1.840 |
R-factor | 0.1804 |
Rwork | 0.179 |
R-free | 0.21340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | internal |
RMSD bond length | 0.011 |
RMSD bond angle | 1.500 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.650 | 1.940 |
High resolution limit [Å] | 1.840 | 1.840 |
Rmerge | 0.038 | 0.441 |
Rmeas | 0.047 | 0.522 |
Rpim | 0.018 | 0.204 |
Total number of observations | 172283 | 12431 |
Number of reflections | 26347 | 2150 |
<I/σ(I)> | 21.9 | 1.8 |
Completeness [%] | 83.2 | 46.9 |
Redundancy | 6.5 | 5.8 |
CC(1/2) | 0.997 | 0.931 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 277 | 0.24 mM HAT, 0.12 mM CoA, 0.75 mM ligand. 200+150 (+20) nL sitting drops. Internal focus screen with microseeding. 17.5% MPD, 0.1 M Tris pH 8, 2.5 % PEG3350. Cryo 30% MPD, 5% PEG 3350, 1 mM ligand |