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6V4S

A Closed pore conformation of a Pentameic ligand-gated ion channel with additional N-terminal domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]193
Detector technologyPIXEL
Collection date2016-06-12
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9786
Spacegroup nameP 21 21 2
Unit cell lengths159.406, 337.254, 111.812
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.040 - 3.550
R-factor0.1972
Rwork0.194
R-free0.26810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2vl0 4hfi
RMSD bond length0.017
RMSD bond angle2.269
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1803.640
High resolution limit [Å]3.5503.550
Number of reflections734205125
<I/σ(I)>11
Completeness [%]99.695.5
Redundancy13.312.7
CC(1/2)0.9990.372
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291100 mM Tris pH 7.5, 250 mM CaCl2, 14.5% (w/v) PEG-MME 2000

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PDB entries from 2024-09-11

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