6V25
Complex of mutant (K162M) of E. coli L-asparaginase II with L-Asp
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-22 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.530, 123.967, 76.302 |
Unit cell angles | 90.00, 96.80, 90.00 |
Refinement procedure
Resolution | 24.610 - 1.780 |
R-factor | 0.1374 |
Rwork | 0.136 |
R-free | 0.19280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eca |
RMSD bond length | 0.019 |
RMSD bond angle | 2.222 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 1.810 |
High resolution limit [Å] | 1.780 | 4.830 | 1.780 |
Rmerge | 0.024 | 0.014 | 0.309 |
Rmeas | 0.029 | 0.017 | 0.398 |
Rpim | 0.017 | 0.009 | 0.246 |
Total number of observations | 288124 | ||
Number of reflections | 102698 | 5509 | 3370 |
<I/σ(I)> | 21.3 | ||
Completeness [%] | 94.3 | 99.1 | 62.3 |
Redundancy | 2.8 | 3.5 | 1.9 |
CC(1/2) | 0.998 | 0.829 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 293 | 0.1 M sodium acetate, pH 5.2, 5 mM L-Asp, and 18-20% (w/v) PEG3350 |