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6UYG

Structure of Hepatitis C Virus Envelope Glycoprotein E2c3 core from genotype 6a bound to broadly neutralizing antibody AR3A and non neutralizing antibody E1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-01-25
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97946
Spacegroup nameP 63 2 2
Unit cell lengths209.824, 209.824, 139.942
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.600 - 3.375
R-factor0.2564
Rwork0.254
R-free0.30550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6bkb
RMSD bond length0.002
RMSD bond angle0.548
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0003.460
High resolution limit [Å]3.3753.400
Number of reflections259161258
<I/σ(I)>13.5
Completeness [%]100.0
Redundancy17.2
CC(1/2)0.9200.290
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2M magnesium chloride, 10% (w/v) PEG 3000, 15% ethylene glycol, 0.1M Na-cacodylate, pH=6.5

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