6USV
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and SDZ 220-040
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-11-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.281, 85.131, 121.675 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.497 - 2.304 |
R-factor | 0.1984 |
Rwork | 0.195 |
R-free | 0.25940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nf8 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.084 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.500 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rpim | 0.042 | 0.579 |
Number of reflections | 26575 | 1276 |
<I/σ(I)> | 9.5 | |
Completeness [%] | 95.0 | |
Redundancy | 4.8 | |
CC(1/2) | 0.872 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7 | 291 | 0.2 M HEPES, pH 7.0, 60-90 mM sodium chloride, 15-20% PEG2000 MME |