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6UEL

CPS1 bound to allosteric inhibitor H3B-193

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]120
Detector technologyPIXEL
Collection date2019-06-20
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.00
Spacegroup nameP 1 21 1
Unit cell lengths99.587, 132.342, 142.443
Unit cell angles90.00, 102.57, 90.00
Refinement procedure
Resolution139.030 - 1.900
R-factor0.1739
Rwork0.172
R-free0.20860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dot
RMSD bond length0.019
RMSD bond angle1.841
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]139.03050.0001.930
High resolution limit [Å]1.9005.1601.900
Rmerge0.0980.0500.987
Rmeas0.1100.0551.110
Rpim0.0480.0240.499
Number of reflections2810851405614009
<I/σ(I)>6.2
Completeness [%]99.397.599.7
Redundancy55.14.8
CC(1/2)0.9930.611
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293CPS1 protein was buffer exchanged into 50 mM glycyl-glycine pH 7.4, 50 mM KCl, 5% glycerol. CPS1 was concentrated to 10 mg/ml and H3B-4193 was added to a 5x excess molar ratio along with 1mM AMPPNP and 1mM NAG. Ligand bound complex crystals grew by hanging drop vapor diffusion in 20% PEG 3350 and 0.2M trisodium citrate

222036

PDB entries from 2024-07-03

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