Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6UBI

N123-VRC34.05 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2016-12-07
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths80.933, 44.278, 125.375
Unit cell angles90.00, 96.20, 90.00
Refinement procedure
Resolution41.724 - 1.903
R-factor0.2394
Rwork0.237
R-free0.28840
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle1.165
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.930
High resolution limit [Å]1.9005.1601.900
Rmerge0.1240.0660.381
Rmeas0.1460.0790.458
Rpim0.0770.0420.251
Total number of observations229936
Number of reflections6716736462709
<I/σ(I)>5.6
Completeness [%]96.498.978.4
Redundancy3.43.52.7
CC(1/2)0.9910.815
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M HEPES, pH 7, 30% PEG6000

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon