6U6X
Human SAMHD1 bound to deoxyribo(C*G*C*C*T)-oligonucleotide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-24 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97923 |
Spacegroup name | P 1 |
Unit cell lengths | 69.360, 81.870, 106.000 |
Unit cell angles | 69.72, 76.30, 82.77 |
Refinement procedure
Resolution | 61.660 - 2.580 |
R-factor | 0.197 |
Rwork | 0.196 |
R-free | 0.23650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3u1n |
RMSD bond length | 0.017 |
RMSD bond angle | 1.193 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.660 | 2.650 |
High resolution limit [Å] | 2.580 | 2.580 |
Rmerge | 0.050 | 0.971 |
Rpim | 0.035 | 0.684 |
Number of reflections | 65305 | 4856 |
<I/σ(I)> | 12.3 | 1.2 |
Completeness [%] | 97.8 | 97.9 |
Redundancy | 2.9 | 3 |
CC(1/2) | 0.999 | 0.619 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.2 M sodium tartrate dibasic, 20% polyethylene glycol 3350 |