Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6U6M

Crystal structure of a vaccine-elicited anti-HIV-1 rhesus macaque antibody DH840.1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2017-10-20
DetectorADSC QUANTUM 210r
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths66.110, 75.080, 93.110
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.566 - 2.683
R-factor0.2249
Rwork0.220
R-free0.26950
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6c6x
RMSD bond length0.002
RMSD bond angle0.503
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.5702.779
High resolution limit [Å]2.6832.683
Rmerge0.1790.684
Rmeas0.1990.780
Rpim0.0850.368
Number of reflections125471171
<I/σ(I)>12.013.56
Completeness [%]93.087.98
Redundancy4.43.6
CC(1/2)0.9900.795
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.22930.2 M Sodium chloride, 0.1 M Phosphate/citrate, 20 % w/v PEG 8000

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon