6U08
Double-stranded DNA-specific cytidine deaminase type VI secretion system effector and cognate immunity complex from Burkholderia cenocepacia
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-19 |
Detector | DECTRIS PILATUS3 R CdTe 300K |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 126.760, 144.953, 64.186 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.603 - 2.491 |
R-factor | 0.1745 |
Rwork | 0.172 |
R-free | 0.22750 |
Structure solution method | SAD |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.603 | 2.530 |
High resolution limit [Å] | 2.491 | 2.491 |
Rmerge | 0.120 | |
Number of reflections | 78988 | 1339 |
<I/σ(I)> | 32.7 | |
Completeness [%] | 98.9 | 100 |
Redundancy | 13 | 12.6 |
CC(1/2) | 0.865 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 25% PEG 3350, 0.1 M Bis-Tris:Hcl pH 6.5, 200 mM MgCl2 |