6T8X
Crystal structure of MAPKAPK2 (MK2) complexed with PF-3644022 and 5-(4-bromophenyl)-N-[4-(1-piperazinyl)phenyl]-N-(2-pyridinylmethyl)-2-furancarboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-09-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 131.531, 287.339, 148.407 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 120.000 - 2.810 |
R-factor | 0.2287 |
Rwork | 0.228 |
R-free | 0.24720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ny3 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.960 |
Data reduction software | xia2 |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.7 (3-OCT-2019)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 143.670 | 2.880 |
High resolution limit [Å] | 2.810 | 2.810 |
Rmerge | 0.083 | 1.495 |
Rmeas | 0.100 | |
Number of reflections | 68678 | 28351 |
<I/σ(I)> | 10.6 | 1 |
Completeness [%] | 100.0 | 99.7 |
Redundancy | 6.1 | 6.2 |
CC(1/2) | 0.998 | 0.668 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 295 | 1.3M NaMalonate, 0.1M Hepes pH6.0, 0.5% jeffamine ED2003 |