6T6D
Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2149
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-01-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9763 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 198.091, 101.882, 84.271 |
Unit cell angles | 90.00, 111.43, 90.00 |
Refinement procedure
Resolution | 78.450 - 2.560 |
R-factor | 0.2242 |
Rwork | 0.222 |
R-free | 0.27170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6srh |
RMSD bond length | 0.002 |
RMSD bond angle | 0.459 |
Data reduction software | xia2 (1.12) |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER (1.13_2998) |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 89.130 | 2.630 |
High resolution limit [Å] | 2.560 | 2.560 |
Rmerge | 0.197 | 3.197 |
Rmeas | 0.205 | 3.323 |
Rpim | 0.056 | 0.901 |
Number of reflections | 50340 | 3699 |
<I/σ(I)> | 8.8 | 1.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.3 | 13.5 |
CC(1/2) | 0.998 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.9 | 277 | 0.1M citrate pH 4.9, 1M ammonium sulfate, 0.2M sodium/potassium tartrate |