6T5Y
Crystal structure of AmpC from E.coli with Zidebactam (WCK 5107)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-13 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97624 |
Spacegroup name | P 43 3 2 |
Unit cell lengths | 137.760, 137.760, 137.760 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.608 - 1.300 |
R-factor | 0.1326 |
Rwork | 0.132 |
R-free | 0.14870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1iem |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 68.880 | 68.880 | 1.330 |
High resolution limit [Å] | 1.300 | 5.810 | 1.300 |
Rmerge | 0.120 | 0.062 | 3.110 |
Rmeas | 0.121 | 0.062 | 3.132 |
Rpim | 0.014 | 0.007 | 0.365 |
Total number of observations | 8261802 | 95965 | 582787 |
Number of reflections | 109248 | 1440 | 7958 |
<I/σ(I)> | 26.8 | 86.6 | 2.5 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 75.6 | 66.6 | 73.2 |
CC(1/2) | 1.000 | 1.000 | 0.801 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 24% w/v PEG6000, 0.01 ZnCl2, 0.1 M MES pH=6.0 |