6T26
X-ray crystal structure of Vibrio alkaline phosphatase with the non-competitive inhibitor cyclohexylamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-21 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 76.916, 85.270, 84.785 |
Unit cell angles | 90.00, 113.55, 90.00 |
Refinement procedure
Resolution | 28.721 - 2.265 |
R-factor | 0.1623 |
Rwork | 0.160 |
R-free | 0.20640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3e2d |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.15.2_3472: ???) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.430 | 29.430 | 2.320 |
High resolution limit [Å] | 2.260 | 10.130 | 2.260 |
Rmerge | 0.101 | 0.046 | 0.722 |
Rmeas | 0.109 | 0.051 | 0.784 |
Rpim | 0.042 | 0.020 | 0.303 |
Total number of observations | 315308 | 3207 | 19763 |
Number of reflections | 46452 | 536 | 3062 |
<I/σ(I)> | 13 | 38.2 | 2.3 |
Completeness [%] | 99.0 | 95.5 | 88.4 |
Redundancy | 6.8 | 6 | 6.5 |
CC(1/2) | 0.998 | 0.995 | 0.810 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 10 mg/mL Protein, 200 mM cyclohexylamine pH 8.0, 0.5 M NaCl, 22% (w/v) PEG3350 0.1 M Tris pH 7.0. |