6SZO
The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-galacturonate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9891 |
Spacegroup name | P 1 |
Unit cell lengths | 44.626, 46.138, 50.195 |
Unit cell angles | 63.65, 86.79, 71.17 |
Refinement procedure
Resolution | 44.740 - 2.200 |
R-factor | 0.1594 |
Rwork | 0.154 |
R-free | 0.22100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6gs0 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.262 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX (1.15.2_3472) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.740 | 2.277 |
High resolution limit [Å] | 2.198 | 2.198 |
Rmerge | 0.081 | 0.480 |
Rmeas | 0.101 | 0.594 |
Rpim | 0.058 | 0.345 |
Number of reflections | 16711 | 1620 |
<I/σ(I)> | 8.66 | 2 |
Completeness [%] | 97.0 | 94.62 |
Redundancy | 2.7 | 2 |
CC(1/2) | 0.996 | 0.747 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Enzyme mixed 50/50 with reservoir solution containing Morpheus screen solution E8: 0.12 M Ethylene glycols (0.3M Diethylene glycol; 0.3M Triethylene glycol; 0.3M Tetraethylene glycol; 0.3M Pentaethylene glycol), 0.1 M Buffer System 2 pH 7.5 (Sodium HEPES; MOPS), and 50 % v/v Precipitant Mix 4 (25% v/v MPD; 25% PEG 1000; 25% w/v PEG 3350) |