6SRH
Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2117
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-10-12 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 127.170, 84.830, 88.080 |
Unit cell angles | 90.00, 130.87, 90.00 |
Refinement procedure
Resolution | 48.080 - 1.250 |
R-factor | 0.1338 |
Rwork | 0.132 |
R-free | 0.16010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3q4u |
RMSD bond length | 0.007 |
RMSD bond angle | 1.036 |
Data reduction software | xia2 (0.5.655-g749651b0-dials-1.11) |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.080 | 1.280 |
High resolution limit [Å] | 1.250 | 1.250 |
Rmerge | 0.045 | 0.579 |
Rmeas | 0.061 | 0.808 |
Rpim | 0.041 | 0.562 |
Number of reflections | 187555 | 10153 |
<I/σ(I)> | 10 | 1.1 |
Completeness [%] | 96.3 | 70.8 |
Redundancy | 3.4 | 2.1 |
CC(1/2) | 0.998 | 0.630 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 277 | 0.1M citrate pH 6.0 -- 1.4M ammonium sulfate -- 0.2M sodium/potassium tartrate |