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6SF6

Crystal structure of the mAb 15A in complex with COMP-epitope P6

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2014-05-10
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9763
Spacegroup nameP 21 21 21
Unit cell lengths80.174, 84.421, 151.885
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution84.000 - 1.900
R-factor0.1752
Rwork0.174
R-free0.20310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1iqw 2ipt
RMSD bond length0.009
RMSD bond angle1.301
Data reduction softwarexia2
Data scaling softwareAimless (0.2.17)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0069)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]84.4201.940
High resolution limit [Å]1.9001.900
Rmerge0.0620.539
Rmeas0.0710.617
Rpim0.0340.292
Total number of observations318137
Number of reflections807124597
<I/σ(I)>12.6
Completeness [%]98.999.3
Redundancy3.93.9
CC(1/2)0.9980.731
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.429330% polyethylene glycol 8000, 0.2 M ammonium sulphate 10 mg/ml 15A Fab fragment + P6 peptide (molar ratio 1:1.2) in 20 mM Tris HCl pH 7.4, 50 mM NaCl

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PDB entries from 2024-07-10

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