6SE2
Trypanosoma cruzi farnesyl diphosphate synthase apo structure with zinc ions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 57.935, 57.935, 397.468 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.780 - 1.450 |
R-factor | 0.1708 |
Rwork | 0.170 |
R-free | 0.18680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yhl |
RMSD bond length | 0.008 |
RMSD bond angle | 0.913 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 397.468 | 1.540 |
High resolution limit [Å] | 1.450 | 1.450 |
Number of reflections | 71946 | 11290 |
<I/σ(I)> | 32.83 | 6.42 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 5.4 | |
CC(1/2) | 0.999 | 0.961 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 4mM ZnSO4+ 8 mM MES pH:6.50, 12.36% PEG MME 550, 11.57% Glycerol. crystal obtained by microseeding: 160mM (NH4)2SO4, 80mM NaOAc pH:5.00, 20% PEG 4000, 20% Glycerol. |