6SCY
U34-tRNA thiolase NcsA from Methanococcus maripaludis with its [4Fe-4S] cluster
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-07 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.980096 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.980, 84.480, 145.440 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.850 - 2.810 |
R-factor | 0.213 |
Rwork | 0.209 |
R-free | 0.28700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vrh |
Data reduction software | XDS (20170615) |
Data scaling software | XDS (20170615) |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.480 | 2.860 |
High resolution limit [Å] | 2.790 | 2.790 |
Rmerge | 0.183 | 6.890 |
Rmeas | 0.194 | 7.304 |
Rpim | 0.088 | 2.366 |
Number of reflections | 17385 | 1150 |
<I/σ(I)> | 7.5 | 0.3 |
Completeness [%] | 99.3 | 91.5 |
Redundancy | 9 | 9 |
CC(1/2) | 0.997 | 0.146 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 292.15 | anaerobic conditions (glove box). 0.1M HEPES pH 7.5, 0.2 M ammonium sulfate, 18% (w/v) PEG 4000, 10% isopropanol |