6S9E
Tubulin-GDP.AlF complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.999, 157.357, 180.261 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.003 - 2.250 |
R-factor | 0.2041 |
Rwork | 0.203 |
R-free | 0.22780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o2b |
RMSD bond length | 0.002 |
RMSD bond angle | 0.526 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.003 | 48.000 | 2.290 |
High resolution limit [Å] | 2.250 | 12.320 | 2.250 |
Rmerge | 0.075 | 0.033 | 1.222 |
Rmeas | 0.080 | 0.035 | 1.295 |
Rpim | 0.025 | 0.012 | 0.417 |
Total number of observations | 8884 | 62409 | |
Number of reflections | 140201 | 982 | 6786 |
<I/σ(I)> | 16.5 | 54.5 | 1.8 |
Completeness [%] | 99.0 | 98.5 | 97.8 |
Redundancy | 9.6 | 9 | 9.2 |
CC(1/2) | 0.979 | 0.999 | 0.635 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.1M MES, 0.1M IMIDAZOLE, pH6.5, 0.03M CaCl2, 0.03M MgCl2, 5mM L-Tyrosine, 5% Glycerol, 5.5% PEG4000 |