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6S15

Pyridine derivative of the natural alkaloid Berberine as Human Telomeric G-quadruplex Binder

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 5.2R
Synchrotron siteELETTRA
Beamline5.2R
Temperature [K]100
Detector technologyPIXEL
Collection date2016-04-24
DetectorDECTRIS PILATUS 2M
Wavelength(s)1.0000
Spacegroup nameP 41 21 2
Unit cell lengths41.250, 41.250, 68.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.350 - 1.700
R-factor0.2684
Rwork0.266
R-free0.29350
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5cdb
RMSD bond length0.010
RMSD bond angle1.836
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.3501.740
High resolution limit [Å]1.7001.700
Rmerge0.0780.320
Rmeas0.0810.330
Number of reflections6173418
<I/σ(I)>21.743.54
Completeness [%]99.196.35
Redundancy22.920
CC(1/2)0.9900.990
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5296Potassium Cacodylate, Lithium Sulfate, Magnesium Sulfate, Iso-propanol

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