6RXM
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16-Acetyl peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 92.300, 95.380, 168.830 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.469 - 1.920 |
R-factor | 0.2046 |
Rwork | 0.204 |
R-free | 0.24250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 1S5P |
RMSD bond length | 0.010 |
RMSD bond angle | 1.300 |
Data reduction software | XDS (VERSION JAN 31, 2018) |
Data scaling software | XSCALE (VERSION JAN 31, 2018) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.469 | 48.469 | 1.970 |
High resolution limit [Å] | 1.920 | 8.590 | 1.920 |
Rmerge | 0.120 | 0.064 | 1.378 |
Rmeas | 0.125 | 0.067 | 1.438 |
Total number of observations | 1478073 | ||
Number of reflections | 114176 | 1421 | 8343 |
<I/σ(I)> | 13.87 | 37.25 | 1.96 |
Completeness [%] | 100.0 | 99 | 100 |
Redundancy | 12.946 | 11.493 | 12.446 |
CC(1/2) | 0.998 | 0.998 | 0.679 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 0.1 M Bis-Tris, 0.03 HCl, 23% PEG3350 |