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6RX3

Crystal structure of human syncytin 2 in post-fusion conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2017-11-10
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.98
Spacegroup nameP 32 2 1
Unit cell lengths91.416, 91.416, 69.725
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.700 - 2.200
R-factor0.216
Rwork0.214
R-free0.25600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6rx1
RMSD bond length0.010
RMSD bond angle1.080
Data reduction softwareXDS (v2016)
Data scaling softwareAimless (0.5.28)
Phasing softwarePHASER (2.6.1)
Refinement softwareBUSTER (2.10.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.7002.270
High resolution limit [Å]2.2002.200
Rmerge0.1180.198
Rmeas0.1300.216
Rpim0.0530.873
Number of reflections173101474
<I/σ(I)>11.51.1
Completeness [%]99.599
Redundancy11.311.5
CC(1/2)1.0000.527
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52910.1 M Tris pH 8.5, 25% v/v tert-butanol

246031

PDB entries from 2025-12-10

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