6RO1
X-ray crystal structure of the MTR4 NVL complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-28 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.000 |
Spacegroup name | P 61 |
Unit cell lengths | 184.365, 184.365, 90.528 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 60.348 - 3.070 |
R-factor | 0.2256 |
Rwork | 0.223 |
R-free | 0.25710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ieh |
RMSD bond length | 0.003 |
RMSD bond angle | 0.478 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 92.180 | 92.180 | 3.220 |
High resolution limit [Å] | 3.070 | 10.170 | 3.070 |
Rmerge | 0.157 | 0.049 | 5.270 |
Rmeas | 0.168 | 0.052 | 5.640 |
Rpim | 0.057 | 0.018 | 1.990 |
Number of reflections | 33031 | 961 | 4350 |
<I/σ(I)> | 12.6 | ||
Completeness [%] | 99.9 | 99.9 | 99.5 |
Redundancy | 16.5 | 15.3 | 15.7 |
CC(1/2) | 0.990 | 0.990 | 0.627 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 277 | 0.1M Tris/HCl pH 8.0, 1.8M Ammonium Sulphate |