6R6A
Major aspartyl peptidase 1 from C. neoformans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-X |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-16 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 1.54187 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 97.360, 112.641, 91.031 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 73.660 - 1.800 |
R-factor | 0.1785 |
Rwork | 0.177 |
R-free | 0.20700 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 6r61 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.597 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 73.660 | 73.660 | 1.910 |
High resolution limit [Å] | 1.800 | 5.370 | 1.800 |
Rmerge | 0.087 | 0.035 | 0.565 |
Rmeas | 0.101 | 0.040 | 0.771 |
Total number of observations | 138736 | ||
Number of reflections | 39317 | 1854 | 2229 |
<I/σ(I)> | 11.68 | 33.46 | 0.99 |
Completeness [%] | 84.3 | 98.3 | 29.8 |
Redundancy | 3.529 | 4.185 | 1.252 |
CC(1/2) | 0.997 | 0.999 | 0.590 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | protein (83 mg/mL) in 50 mM sodium acetate, pH 5.0, 100 mM sodium chloride with reservoir solution composed of 200 mM lithium sulfate, 45% (v/v) PEG-400, 100 mM sodium acetate pH 4.5. |