6R3V
Crystal Structure of RhoA-GDP-Pi in Complex with RhoGAP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-24 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.91732 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 114.060, 122.780, 67.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.480 - 1.750 |
R-factor | 0.17849 |
Rwork | 0.177 |
R-free | 0.20681 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | WWPDB ENTRY 1OXT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.761 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.480 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.040 | 1.300 |
Rpim | 1.560 | |
Number of reflections | 47885 | 2635 |
<I/σ(I)> | 19.1 | 1.4 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 6.7 | 6.7 |
CC(1/2) | 0.679 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | Equal amounts of reservoir solution containing 18% PEG2000 MME, 100 mM MES, pH 6.0, 10 mM MgCl2, 3 mM DTT, 3 mM NaN3, 120 mM ammonium sulphate and stock solution of the RhoA/RhoGAP protein complex at 800 mM in 20 mM Tris.HCl, pH 7.4, with 2 mM AlCl3, 10 mM MgCl2, and 20 mM NaF. |